The Tasmanian Devil and Cancer as an Infectious Disease: Analysis of...
The Tasmanian devil (Sarcophilus harrisii), the last remaining large marsupial carnivore, now faces extinction because of a strange and deadly infection: a transmissible cancer known as Devil Facial...
View ArticleThe Human Reference Genome – Understanding the New Genome Assemblies
What is a genome assembly? The haploid human genome consists of 22 autosomal chromosomes and the Y and the X chromosomes. Each of the chromosomes represents a single DNA molecule, a sequence of...
View ArticleThe Tasmanian Devil 2: The tumor and Tasmanian devil mitochondrial genomes
The Tasmanian devil (Sarcophilus harrisii), the last remaining large marsupial carnivore, now faces extinction because of a strange and deadly infection, a transmissible cancer known as Transmissible...
View ArticlePittsburgh Genomics Hackathon assisted by NCBI September 25 – 27, 2017
From September 25-27,2017, NCBI will help with a bioinformatics hackathon at the University of Pittsburgh. The hackathon will focus on advanced bioinformatics analysis of next generation sequencing...
View ArticleAugust 23 NCBI Minute: Using the Run Selector to Find Relevant...
Do you have trouble searching the NCBI webpage for relevant datasets? Wish you could filter the search results more precisely? You can with SRA Run Selector. In this NCBI Minute, you’ll learn how to...
View ArticleNCBI to assist in Southern California genomics hackathon in January
From January 10-12, 2018, the NCBI will help with a bioinformatics hackathon in Southern California hosted by San Diego State University. The hackathon will focus on advanced bioinformatics analysis of...
View ArticleSuggest a project for the next NIH hackathon!
The NCBI will host a collaborative biodata science hackathon on the NIH Campus in Bethesda, Maryland February 20-22. We are now collecting project proposals focusing on building tools and pipelines for...
View ArticleFlorida (USF) Biological Data Science “IronHack” February 25-27, 2019
From February 25-27, 2019, NCBI will help with a Data Science hackathon at USF in Tampa Florida! The hackathon will focus on the genomics of Iron-linked Rare Diseases as well as large scale RNA-Seq...
View ArticleAnnouncing the first ever RNA-Seq in the Cloud hackathon!
From March 11-13, 2019, the NCBI will help run a bioinformatics hackathon in the North Carolina Research Triangle hosted by the University of North Carolina, Chapel Hill (UNC). Potential topics...
View ArticlePropose a project for NCBI’s first ever Women’s BioData Science Hackathon May...
This May, the NCBI will host a women’s collaborative biodata science hackathon on the NIH Campus in Bethesda, Maryland! We are now collecting project proposals focusing on building tools and pipelines...
View ArticleNCBI at ASHG 2019: Two Data CoLabs Demonstrate How to Analyze NextGen...
NCBI will be attending the American Society of Human Genetics (ASHG) 2019 in Houston Texas on Oct 15-19. This year, we will be presenting two CoLabs – interactive sessions where you can learn about new...
View ArticleNovember 13 NCBI Minute: Resources for next-gen sequence analysis
On Wednesday, November 13, 2019 at 12 PM, NCBI staff will present a webinar on NCBI resources for next-gen sequence analysis. You will learn about key resources that support multiple aspects of...
View ArticleRequest for proposals: Single Cell in the Cloud codeathon at NYGC in January
The New York Genome Center is hosting an NCBI Single Cell in the cloud codeathon from January 15-17, 2020. Submissions for project proposals are due December 2nd. Please submit your proposal and apply...
View ArticleView BAM alignments in the NCBI genome browsers and sequence viewers sorted...
NCBI’s genome browsers and graphical sequence viewers now allow you to view BAM alignments sorted by haplotype tag. This option is useful for analyzing variants within a sequenced sample and can help...
View ArticleThe entire corpus of the Sequence Read Archive (SRA) now live on two cloud...
The National Library of Medicine (NLM) is pleased to announce that all controlled-access and publicly available data in SRA is now available through Google Cloud Platform (GCP) and Amazon Web Services...
View ArticleApril 8 Webinar: Accelerate genomics discovery with SRA in the cloud
On Wednesday, April 8, 2019 at 12 PM, NCBI staff will show you how to leverage the cloud to speed up your research and discovery. You’ll be introduced to new and existing tools and data including...
View ArticleSRA cloud sequences hold the promise of additional discoveries related to...
We recently announced that we made all of the Sequence Read Archive (SRA) publicly available on two cloud platforms. This archive of genetic sequences is a treasure trove of information and the cloud...
View ArticleFind SRA datasets in the cloud using BigQuery Taxonomy Analysis tables!
Now that the Sequence Read Archive (SRA) is publicly available on the cloud, you can harness the power of high-performance cloud computing to analyze all the data you wish without having to download a...
View ArticleMay 20 webinar: Exploring SRA metadata in the cloud with BigQuery
Join us on May 20th to learn how to use Google’s BigQuery to quickly search the data from the Sequence Read Archive (SRA) in the cloud to speed up your bioinformatic research and discovery projects....
View ArticleWe want to hear from you about changes to NIH’s Sequence Read Archive data...
NIH’s Sequence Read Archive (SRA) is the largest, most diverse collection of next generation sequencing data from human, non-human and microbial sources. Hosted by the National Center for Biotechnology...
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